Session 58. Free communications: genomic selection and genomewide association studies

Date: 01 September 2011; 14:00 - 18:00 hours
Chairperson: Szyda

Theatre Session 58

• Results from genomic selection in Pietrain pig breeding
  Bennewitz, J., Wellmann, R., Neugebauer, N., Tholen, E. and Wimmers, K.
• Genomic selection in maternal pig breeds
  Lillehammer, M., Meuwissen, T.H.E. and Sonesson, A.K.
• Genomic selection using Bayesian mixture models for reduction of aggressive behaviour in pigs
  Kapell, D.N.R.G., Ashworth, C.J., Turner, S.P., D’eath, R.B., Lundeheim, N., Rydhmer, L., Lawrence, A.B. and Roehe, R.
• Most of the benefits from genomic selection can be realised by genotyping a proportion of selection candidates
  Henryon, M., Berg, P., Sørensen, A.C., Ostersen, T. and Nielsen, B.
• Potential of genomic selection for traits with a limited number of phenotypes
  Van Grevenhof, E.M., Van Arendonk, J.A.M. and Bijma, P.
• Accuracy of imputation in a sparsely-genotyped pig pedigree
  Cleveland, M.A., Kinghorn, B.P. and Hickey, J.M.
• Effect of genotype imputation errors on the accuracy of genomic selection
  Neugebauer, N., Wellmann, R. and Bennewitz, J.
• Application of generalized BayesA and BayesB in the analysis of genomic data
  Strandén, I., Mrode, R. and Berry, D.P.
• Genomic prediction on pigs using the single-step method
  Christensen, O.F., Madsen, P., Nielsen, B., Ostersen, T. and Su, G.
• Effect of different genomic relationship matrices on accuracy and scale
  Misztal, I., Chen, C.Y., Aguilar, I., Vitezica, Z.G., Legarra, A. and Muir, W.M.
• Flexible prior specification for the genetic covariance matrix via the generalized inverted Wishart distribution
  Munilla, S. and Cantet, R.J.C.
• Genome-wide association study for inguinal- and umbilical hernias using the 60K Porcine SNParray
  Grindflek, E., Hansen, M.H.S., Hamland, H. and Lien, S.
• Genome-wide association study for carcass and meat quality traits in commercial French Large White pigs
  Shumbusho, F., Le Mignon, G., Bidanel, J.-P. and Larzul, C.
• A genome-wide association scan for loci affecting osteochondrosis in German Warmblood horses
  Tetens, J., Wulf, I.R., Kühn, C. and Thaller, G.

Poster Session 58

• Using Richards mixed effects growth model in different goose lines
  Vitezica, Z.G., Lavigne, F., Dubois, J.P. and Auvergne, A.
• Association between cholecystokinin type A receptor gene haplotypes and growth traits in Hinai-dori chicken cross
  Rikimaru, K., Komatsu, M., Suzuki, K. and Takahashi, H.
• Candidate gene analysis and fine mapping of quantitative trait loci for intramuscular fat content on SSC 13 in a Duroc purebred population
  Nakano, H., Uemoto, Y., Kikuchi, T., Sato, S., Shibata, T., Kadowaki, H., Kobayashi, E. and Suzuki, K.
• Genome-wide mapping and SCD gene effects for fatty acid composition and melting point of fat in a Duroc purebred population
  Uemoto, Y., Nakano, H., Kikuchi, T., Soma, Y., Sato, S., Shibata, T., Kadowaki, H., Kobayashi, E. and Suzuki, K.
• Estimation of genetic parameters for udder traits using a Random Regression Model on age at classification for Holsteins in Japan
  Osawa, T., Hagiya, K. and Oka, T.
• Desired genetic gains for a breeding objective: a novel participatory approach
  Sae-Lim, P., Komen, H., Kause, A., Van Arendonk, J.A.M., Barfoot, A.J., Martin, K.E. and Parsons, J.E.
• Effects of GH, FASN and SCD gene polymorphisms on fatty acid composition in Japanese Black cattle
  Yokota, S., Sugita, H., Suda, Y., Katoh, K. and Suzuki, K.
• Estimation of genetic parameters for milkability using threshold methodology in a Bayesian framework
  König, S., Tong, Y. and Simianer, H.
• Association of polymorphisms in the Leptin gene with carcass and meat quality traits in Italian Friesian young bulls
  Catillo, G., Grandoni, F., Vincenti, F., Antonelli, S., Iacurto, M., Moioli, B. and Napolitano, F.
• Role of LEP gene on porcine productive traits related to appetite, interaction with LEPRc.1987C>T SNP
  Pérez-Montarelo, D., Fernández, A., López, M.A., Folch, J.M., Pena, R.N., Óvilo, C., Rodríguez, C., Silió, L. and Fernández, A.I.
• Variance component estimates for growth traits in South African Brangus cattle
  Neser, F.W.C., Van Wyk, J.B., Fair, M.D., Lubout, P.C. and Crook, B.
• Introgressed background removal using genetic distances
  Amador, C., Toro, M.A. and Fernández, J.
• Quantitative trait loci study in Baluchi sheep
  Dashab, G.R., Aslaminejad, A.A., Nassiri, M.R., Esmailizadeh Koshkoih, A., Sahana, G. and Saghi, D.A.
• Association between somatic cell count and functional longevity in Polish Holstein-Friesian cows
  Morek-Kopec, M. and Zarnecki, A.
• Preliminary studies on mitochondrial DNA control region partial sequence in Polish native Swiniarka sheep
  Krawczyk, A., Słota, E. and Rychlik, T.
• Genetic parameters for birth weight and its environmental variability in a divergent selection experiment for birth weight variability in mice
  Pun, A., Cervantes, I., Nieto, B., Salgado, C., Pérez-Cabal, M.A. and Gutiérrez, J.P.
• Linkage disequilibrium and haplotype blocks in chicken layer lines
  Lipkin, E., Fulton, J., Arango, J., O’sullivan, N.P. and Soller, M.
• Genetic profile of Sztumski and Sokolski cold blooded horses in Poland
  Polak, G.M., Mackowiak, M., Zabek, T. and Fornal, A.
• Estimation of inbreeding based on effective number for Baluchi, Arman and Iran Black breed of sheep
  Hosseinpour Mashhadi, M., Vakili, A., Jenati, H., Jafari, M., Shokrolahi, B. and Tabasi, N.
• Genetic selection response in scenarios of maximization of genetic variance in small populations: preliminary results
  Cervantes, I., Gutiérrez, J.P. and Meuwissen, T.H.E.
• Frequency and effect of the bovine DGAT1 (K232A) variants on milk production traits in Iranian Holstein dairy cattle
  Ahani, S., Hosseinpour Mashhadi, M., Nassiry, M.R. and Aminafshar, M.
• Relationship between the leptin LEP/Sau AI polymorphism and fatty acid profile in muscle tissue of beef cattle
  Oprzadek, J.M., Urtnowski, P.S., Dymnicki, E., Sender, G. and Pawlik, A.
• Characterization of the ovine lipoprotein lipase (LPL), Scavenger Receptor BI (SCARB ) and alpha-tocopherol transfer protein (TTPA) genes: it is role in vitamin E content
  González-Calvo, L., Dervishi, E., Serrano, M., Joy, M. and Calvo, J.H.
• Cattle breed discrimination based on microsatellites markers
  Vrtkova, I., Stehlik, L., Putnova, L. and Bartonova, P.
• A frameshift mutation within LAMC2 is responsible for Herlitz type junctional epidermolysis bullosa in Black Headed Mutton sheep
  Mömke, S., Kerkmann, A. and Distl, O.
• Phylogenetic study of the Iranian buffalo population using ISSR markers
  Aminafshar, M., Amirinia, C., Vaez Torshizi, R. and Hosseinpour Mashhadi, M.
• Genome-wide associations for fertility traits in Holstein-Friesian cows using data from four European countries
  Berry, D.P., Bastiaansen, J.W.M., Veerkamp, R.F., Wijga, S., Strandberg, E., Wall, E. and Calus, M.P.L.
• Life-time genetic profiles for animal price
  Mc Hugh, N., Evans, R.D. and Berry, D.P.
• Genetic parameters for age specific lamb survival, birth and weaning weights in South African Merino sheep
  Matebesi-Ranthimo, P.A.M., Cloete, S.W.P., Van Wyk, J.B., Olivier, J.J. and Zishiri, O.T.
• Whole genome association study for energy balance and fat protein ratio in German Holstein bull dams
  Seidenspinner, T., Buttchereit, N., Tetens, J. and Thaller, G.
• Effect of age of dam on the carcass performance of progeny in Japanese Black cattle
  Kato, K., Nakahashi, Y. and Kuchida, K.
• A whole genome association study using the 60K porcine SNP beadchip reveals candidate susceptibility loci for scrotal hernia in pigs
  Stinckens, A., Janssens, S., Spincemaille, G. and Buys, N.
• Genetic parameters for somatic cell score in Croatian Holstein cattle
  Špehar, M., Ivkić, Z., Gorjanc, G., Bulić, V., Mijić, P. and Barać, Z.
• Estimation of genetic parameters for SEUROP carcass traits in Czech beef cattle
  Veselá, Z., Vostrý, L., Přibyl, J. and Šafus, P.
• Genetic trends for milk yield, milk components and milk coagulation properties in Italian Holstein Friesian and Estonian Holstein dairy cattle population
  Pretto, D., Vallas, M., Kaart, T., Ancilotto, L., Cassandro, M. and Pärna, E.
• Genetic diversity and similarity between the Amiata donkey breed and a donkey population native from Lazio
  Matassino, D., Bramante, A., Cecchi, F., Ciani, F., Incoronato, C., Occidente, M., Pasquariello, R. and Ciampolini, R.
• Application of genomic evaluation for Canadian Yorkshire pigs: a preliminary study
  Jafarikia, M., Schenkel, F., Maignel, L., Fortin, F., Wyss, S., Sargolzaei, M. and Sullivan, B.
• Calpain and calpastatin markers associations on growth, ultrasound measures and feed efficiency traits in Bos indicus cattle (Nellore)
  Ferraz, J.B.S., Gomes, R.C., Carvalho, M.E., Santana, M.H.A., Silva, S.L., Leme, P.R., Rossi, P., Rezende, F.M. and Eler, J.P.
• Adult Merino ewes can be bred for live weight change to be more tolerant to climate change
  Rose, G., Kause, A., Van Der Werf, J.H.J., Thompson, A.N., Ferguson, M.B. and Van Arendonk, J.A.M.
• Exploring trend of bias to prediction of genomic breeding values using Bayesian variable selection in the populations undergoing selection
  Ehsani, A., Janss, L. and Christensen, O.F.
• Isolation and characterization of microsatellite loci in Iranian River buffalo using PIMA
  Shokrollahi, B., Amirinia, C., Dinparast Djadid, N. and Hosseinpour, M.
• Isolation of three SINLE-like sequences in Iranian River Buffalo
  Shokrollahi, B., Karimi, K., Aminafshar, M. and Hosseinpour, M.
• SNP association analysis of meat quality traits in the Finnish Landrace pig breed
  Uimari, P. and Sevón-Aimonen, M.-L.